Basic Information
Locus ID:
Ftri18G30055
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 1166082 | 1167710 | - | Ftri18G30055 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.80 | 51,844.39 Da | 37.23 | 93.65 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 259 | 454 | 2.4E-21 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 151 | 172 | 1.7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 103 | 124 | 1.9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 70 | 7.1E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 254 | 4.71E-27 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 240 | 449 | 2.35E-43 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 231 | 331 | 9.8E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 217 | 6.7E-43 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 332 | 459 | 3.0E-19 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 257 | 460 | 24.018625 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G48380.1 | BAK1-interacting receptor-like kinase 1. Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway. | 0 |
| RefSeq | XP_043615660.1 | probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Erigeron canadensis] | 0 |
| Q9ASS4 | Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana OX=3702 GN=At5g48380 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6LDU8 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_43804 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg41083 |
| Apiaceae | Apium graveolens | 1 | Ag7G02197 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.2182.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G30055 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0059, Ceq01G0127 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00013970 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr06G007550 |
| Poaceae | Zea mays | 2 | Zm00001eb046230_P001, Zm00001eb227890_P001 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-24014 |