Basic Information
Locus ID:
Ftri18G27418
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
WRKY transcription factor 20
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 95237610 | 95239639 | - | Ftri18G27418 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 54,751.28 Da | 62.57 | 57.91 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 228 | 283 | 6.2E-22 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 392 | 449 | 9.6E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 221 | 285 | 2.22E-22 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 383 | 451 | 1.96E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 376 | 452 | 4.9E-34 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 214 | 286 | 6.3E-23 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 391 | 450 | 1.5E-37 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 226 | 284 | 7.8E-30 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 221 | 285 | 20.621506 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 386 | 451 | 35.989746 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 309 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_021983199.1 | probable WRKY transcription factor 3 [Helianthus annuus] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A251TXA1 | Putative WRKY domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g0264011 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology