Basic Information
Locus ID:
Ftri18G27216
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 93979001 | 93982939 | - | Ftri18G27216 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 73,527.55 Da | 46.23 | 82.45 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 338 | 601 | 4.82834E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 335 | 600 | 3.0E-43 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 66 | 148 | 2.4E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 202 | 248 | 4.1E-6 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 315 | 635 | 6.88E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 293 | 407 | 8.9E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 408 | 611 | 2.6E-60 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 180 | 251 | 5.2E-7 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 51 | 150 | 3.2E-16 | IPR038408 |
| SMART | SM00220 | serkin_6 | 332 | 600 | 1.4E-29 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 46 | 150 | 15.837099 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 332 | 620 | 36.597885 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 151 | 251 | 8.993711 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 453 | 465 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 625 | 669 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021982308.1 | cysteine-rich receptor-like protein kinase 42 isoform X1 [Helianthus annuus] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251TW26 | Putative cysteine-rich RLK (RECEPTOR-like protein kinase) 42 OS=Helianthus annuus OX=4232 GN=CRK42 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology