Basic Information
Locus ID:
Ftri18G25991
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 96096354 | 96098287 | - | Ftri18G25991 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 69,811.69 Da | 38.06 | 91.18 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 347 | 528 | 1.0E-38 | IPR001245 |
| Pfam | PF01476 | LysM domain | 135 | 174 | 0.03 | IPR018392 |
| Pfam | PF01476 | LysM domain | 201 | 240 | 6.9E-4 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 316 | 612 | 4.37E-57 | IPR011009 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 182 | 251 | 2.0E-5 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 400 | 624 | 1.5E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 337 | 399 | 2.6E-12 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 302 | 610 | 28.598042 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 193 | 239 | 9.903026 | IPR018392 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_021980455.1 | lysM domain receptor-like kinase 4 [Helianthus annuus] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251TYQ9 | Protein LYK5-like OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g0265081 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology