Basic Information
Locus ID:
Ftri18G25894
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 67631043 | 67636801 | + | Ftri18G25894 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.26 | 101,777.98 Da | 32.39 | 89.75 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 608 | 871 | 1.06774E-85 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 614 | 868 | 4.0E-44 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 44 | 385 | 4.76E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 588 | 900 | 1.52E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 159 | 1.7E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 160 | 261 | 3.3E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 675 | 880 | 1.1E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 262 | 362 | 2.8E-14 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 573 | 674 | 6.4E-27 | - |
| SMART | SM00220 | serkin_6 | 602 | 872 | 1.7E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 602 | 872 | 35.537834 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 719 | 731 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_024959577.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Cynara cardunculus var. scolymus] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251TT47 | Putative serine/threonine/dual specificity protein kinase, catalytic domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g0247821 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology