Basic Information
Locus ID:
Ftri18G25667
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 90983051 | 90984126 | - | Ftri18G25667 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 39,289.34 Da | 49.54 | 76.69 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17123 | RING-like zinc finger | 130 | 159 | 3.8E-8 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 110 | 164 | 9.81E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 106 | 175 | 4.1E-14 | IPR013083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 348 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_024995585.1 | RING-H2 finger protein ATL46-like [Cynara cardunculus var. scolymus] | 0 |
| Q9FL07 | RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6Q356 | RING-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_02019 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology