Basic Information
Locus ID:
Ftri18G25470
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
CSC1-like protein RXW8
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 65990262 | 65996033 | + | Ftri18G25470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.20 | 77,167.74 Da | 37.90 | 100.40 | 0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 156 | 2.8E-25 | IPR032880 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 241 | 304 | 1.4E-9 | IPR027815 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 422 | 556 | 5.2E-29 | IPR003864 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 315 | 420 | 3.1E-20 | IPR003864 |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58520.1 | lipases;hydrolases, acting on ester bonds. | 0 |
| RefSeq | XP_035830982.1 | CSC1-like protein RXW8 [Helianthus annuus] | 0 |
| F4IBD7 | CSC1-like protein RXW8 OS=Arabidopsis thaliana OX=3702 GN=RXW8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251UE01 | Putative calcium-dependent channel, 7TM region, putative phosphate OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr07g0205641 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology