Basic Information
Locus ID:
Ftri18G23865
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 85755993 | 85759324 | - | Ftri18G23865 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 102,681.20 Da | 33.85 | 89.39 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 601 | 874 | 1.08553E-97 | - |
| Pfam | PF00069 | Protein kinase domain | 596 | 869 | 1.4E-48 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 336 | 373 | 5.2E-5 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 70 | 7.0E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 54 | 441 | 4.59E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 572 | 882 | 1.54E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 556 | 672 | 3.7E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 335 | 461 | 3.8E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 326 | 1.2E-78 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 673 | 885 | 4.3E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 143 | 168 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 291 | 313 | 110.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 595 | 879 | 2.5E-45 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 96 | 118 | 90.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 119 | 142 | 0.024 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 399 | 422 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 217 | 57.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 595 | 874 | 40.4282 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 98 | 120 | 7.088198 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 601 | 623 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 720 | 732 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 489 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 917 | 946 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 489 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_022011205.1 | receptor protein kinase TMK1 [Helianthus annuus] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251S755 | Putative leucine-rich repeat protein kinase family protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr15g0471781 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology