Basic Information
Locus ID:
Ftri18G21175
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 78833004 | 78836124 | - | Ftri18G21175 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.89 | 107,110.05 Da | 34.15 | 98.74 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 500 | 559 | 4.0E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 62 | 2.7E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 138 | 197 | 3.0E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 212 | 233 | 0.77 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 676 | 892 | 2.5E-38 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 70 | 378 | 4.55E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 656 | 950 | 3.55E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 306 | 594 | 1.36E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 253 | 605 | 3.2E-96 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 767 | 966 | 2.5E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 657 | 766 | 1.9E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 182 | 1.3E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 252 | 1.8E-9 | IPR032675 |
| SMART | SM00220 | serkin_6 | 674 | 949 | 7.9E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 674 | 952 | 32.612099 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 811 | 823 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 680 | 703 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_021998637.1 | receptor-like protein kinase HSL1 [Helianthus annuus] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251T7I7 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr12g0378761 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology