Basic Information
Locus ID:
Ftri18G20549
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 107166038 | 107169540 | - | Ftri18G20549 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 75,712.12 Da | 37.21 | 90.19 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 136 | 195 | 3.4E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 403 | 673 | 5.4E-38 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 63 | 3.3E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 22 | 227 | 4.25E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 381 | 673 | 1.39E-65 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 365 | 483 | 1.1E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 484 | 692 | 5.6E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 173 | 6.0E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 174 | 240 | 1.8E-10 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 134 | 157 | 86.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 88 | 112 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 158 | 181 | 14.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 400 | 676 | 31.961933 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 406 | 433 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 158 | 171 | 6.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 91 | 104 | 6.8E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 272 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 272 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14350.1 | STRUBBELIG-receptor family 7. | 0 |
| RefSeq | XP_023766750.1 | protein STRUBBELIG-RECEPTOR FAMILY 7 [Lactuca sativa] | 0 |
| Q9LUL4 | Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana OX=3702 GN=SRF7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2J6L7H2 | Protein kinase domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_4X89560 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology