Basic Information
Locus ID:
Ftri18G18631
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
phosphatase 2A 55 kDa regulatory subunit B
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 106431368 | 106437863 | - | Ftri18G18631 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 54,160.66 Da | 47.32 | 71.59 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 198 | 234 | 0.13 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 40 | 477 | 3.05E-34 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 21 | 175 | 4.2E-6 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 176 | 481 | 4.1E-18 | IPR015943 |
| SMART | SM00320 | WD40_4 | 369 | 400 | 250.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 32 | 67 | 4.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 446 | 483 | 370.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 304 | 342 | 150.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 245 | 285 | 16.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 97 | 137 | 9.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 195 | 234 | 0.94 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 11 | 484 | 2.0E-195 | IPR000009 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 97 | 111 | - | IPR018067 |
| ProSitePatterns | PS01025 | Protein phosphatase 2A regulatory subunit PR55 signature 2. | 204 | 218 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 453 | 482 | 1.9E-157 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 84 | 112 | 1.9E-157 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 234 | 261 | 1.9E-157 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 319 | 346 | 1.9E-157 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 291 | 318 | 1.9E-157 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 113 | 141 | 1.9E-157 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 206 | 233 | 1.9E-157 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 373 | 399 | 1.9E-157 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 262 | 290 | 1.9E-157 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 46 | 66 | 1.9E-157 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 347 | 372 | 1.9E-157 | IPR000009 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 432 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.2 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 0 |
| RefSeq | XP_021984483.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2 [Helianthus annuus] | 0 |
| Q39247 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana OX=3702 GN=PP2AB2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6NM88 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Mikania micrantha OX=192012 GN=E3N88_21418 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology