Basic Information
Locus ID:
Ftri18G18017
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 106306940 | 106310780 | + | Ftri18G18017 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.60 | 72,116.98 Da | 38.69 | 100.56 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 239 | 419 | 3.22E-12 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 99 | 165 | 1.7E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 168 | 504 | 9.2E-14 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 95 | 153 | 1.8E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
| Coils | Coil | Coil | 213 | 233 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02920.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_021984455.1 | uncharacterized protein LOC110880181 isoform X1 [Helianthus annuus] | 0 |
| Q1PE04 | F-box/LRR-repeat protein 25 OS=Arabidopsis thaliana OX=3702 GN=FBL25 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251U1I8 | Putative F-box domain, Leucine-rich repeat domain, L domain-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g0276031 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology