Basic Information
Locus ID:
Ftri18G17580
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 105826305 | 105828478 | + | Ftri18G17580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 44,719.30 Da | 47.49 | 99.92 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 25 | 61 | 1.0E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 66 | 193 | 4.51E-5 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 70 | 1.44E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 11 | 86 | 1.8E-5 | - |
| SMART | SM00256 | fbox_2 | 29 | 69 | 0.0017 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 23 | 69 | 10.371784 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021980818.1 | putative F-box/LRR-repeat protein At3g28410 [Helianthus annuus] | 0 |
| TrEMBL | A0A2U1M2U3 | F-box domain, cyclin-like protein OS=Artemisia annua OX=35608 GN=CTI12_AA426710 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 3 | Ftri18G04350, Ftri18G17580, Ftri18G34167 |