Basic Information
Locus ID:
Ftri18G17288
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 95415952 | 95419283 | + | Ftri18G17288 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 118,754.40 Da | 35.75 | 98.44 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 823 | 1091 | 3.69484E-88 | - |
| Pfam | PF13855 | Leucine rich repeat | 606 | 665 | 6.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 820 | 1018 | 4.8E-43 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 297 | 318 | 1.0 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 170 | 210 | 1.7E-6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 248 | 270 | 0.54 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 68 | 1.9E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 353 | 704 | 5.95E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 801 | 1088 | 1.48E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 332 | 2.21E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 498 | 723 | 2.4E-43 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 781 | 892 | 1.8E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 229 | 347 | 3.0E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 228 | 5.0E-46 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 351 | 462 | 5.3E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 893 | 1094 | 5.7E-56 | - |
| SMART | SM00369 | LRR_typ_2 | 628 | 651 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 221 | 245 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 294 | 318 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 173 | 197 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 125 | 149 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 652 | 676 | 38.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 817 | 1095 | 9.7E-32 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 22 | 6.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 817 | 1091 | 38.972397 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 823 | 845 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 937 | 949 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 417 | 430 | 8.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 628 | 641 | 8.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.1 | receptor-like protein kinase 2. | 0 |
| RefSeq | XP_024977557.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Cynara cardunculus var. scolymus] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6PPV5 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_06860 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology