Basic Information
Locus ID:
Ftri18G13493
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 105593192 | 105594572 | + | Ftri18G13493 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 43,230.49 Da | 41.13 | 77.18 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 205 | 240 | 1.1E-7 | IPR006652 |
| Pfam | PF00646 | F-box domain | 42 | 83 | 3.6E-5 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 157 | 191 | 2.8E-5 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 117 | 372 | 5.49E-37 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 39 | 86 | 2.09E-9 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 107 | 388 | 3.1E-35 | IPR015915 |
| SMART | SM00612 | kelc_smart | 207 | 254 | 3.7E-6 | IPR006652 |
| SMART | SM00612 | kelc_smart | 156 | 205 | 0.019 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_021984387.1 | F-box/kelch-repeat protein At1g80440 [Helianthus annuus] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251U3D4 | Putative galactose oxidase/kelch repeat superfamily protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g0275381 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology