Basic Information
Locus ID:
Ftri18G13151
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 96537457 | 96541090 | + | Ftri18G13151 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.23 | 67,161.20 Da | 52.96 | 84.65 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 167 | 403 | 2.13958E-116 | - |
| Pfam | PF00069 | Protein kinase domain | 184 | 404 | 1.2E-63 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 183 | 439 | 6.47E-73 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 433 | 587 | 3.51E-17 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 231 | 422 | 1.9E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 430 | 584 | 7.1E-18 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 156 | 230 | 3.1E-13 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 423 | 514 | 7.1E-18 | - |
| SMART | SM00220 | serkin_6 | 131 | 404 | 1.2E-79 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 141 | 404 | 45.332699 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 266 | 278 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 38 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_023743308.1 | CDPK-related kinase 5 [Lactuca sativa] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2J6JUM2 | Protein kinase domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_4X167020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology