HalophFGD

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Basic Information
Locus ID: Ftri18G12267
Species & Taxonomic ID: Flaveria trinervia & 4227
Genome Assembly: GCA_025506515.1
Description: Alkaline neutral invertase
Maps and Mapping Data
Chromosome Start End Strand ID
chr18 91616232 91619099 + Ftri18G12267
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.23 65,193.00 Da 42.85 89.97 -0.25
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12899 Alkaline and neutral invertase 139 539 1.2E-169 IPR024746
SUPERFAMILY SSF48208 Six-hairpin glycosidases 146 541 4.25E-36 IPR008928
Gene Ontology
Biological Process:
GO:0005975 (carbohydrate metabolic process)
Molecular Function:
GO:0033926 (endo-alpha-N-acetylgalactosaminidase activity)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G56560.1 Plant neutral invertase family protein. 0
RefSeq XP_022011872.1 alkaline/neutral invertase A, mitochondrial [Helianthus annuus] 0
Swiss-Prot Q9FXA8 Alkaline/neutral invertase A, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=INVA PE=1 SV=1 0
TrEMBL A0A251S839 Alkaline/neutral invertase OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr15g0478371 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 4 jg16461, jg28272, jg29992, jg5619
Aizoaceae Mesembryanthemum crystallinum 4 gene_10247, gene_2723, gene_6784, gene_8401
Amaranthaceae Atriplex hortensis 3 Ah005342, Ah007035, Ah019987
Amaranthaceae Beta vulgaris 1 BVRB_4g080050
Amaranthaceae Salicornia bigelovii 6 Sbi_jg17561, Sbi_jg26994, Sbi_jg33558, Sbi_jg36017 ...
Sbi_jg517, Sbi_jg62210
Amaranthaceae Salicornia europaea 3 Seu_jg4101, Seu_jg814, Seu_jg8262
Amaranthaceae Suaeda aralocaspica 4 GOSA_00002937, GOSA_00003633, GOSA_00007417, GOSA_00027825
Amaranthaceae Suaeda glauca 8 Sgl01588, Sgl06757, Sgl19325, Sgl21026, Sgl24116, Sgl29295 ...
Sgl73271, Sgl76792
Amaranthaceae Chenopodium album 12 gene:ENSEOMG00000007818, gene:ENSEOMG00000009886 ...
gene:ENSEOMG00000010920, gene:ENSEOMG00000014735, gene:ENSEOMG00000028920, gene:ENSEOMG00000029007, gene:ENSEOMG00000030010, gene:ENSEOMG00000036992, gene:ENSEOMG00000039773, gene:ENSEOMG00000041490, gene:ENSEOMG00000042111, gene:ENSEOMG00000044468
Amaranthaceae Chenopodium quinoa 7 CQ.Regalona.r1.3AG0012910, CQ.Regalona.r1.3BG0012950 ...
CQ.Regalona.r1.4AG0004610, CQ.Regalona.r1.4AG0013000, CQ.Regalona.r1.4BG0004620, CQ.Regalona.r1.4BG0014570, CQ.Regalona.r1.9BG0005260
Anacardiaceae Pistacia vera 4 pistato.v30057010, pistato.v30080870, pistato.v30169810 ...
pistato.v30232690
Apiaceae Apium graveolens 5 Ag11G04364, Ag1G00550, Ag6G02013, Ag6G02279, Ag9G01926
Arecaceae Cocos nucifera 2 COCNU_01G000780, COCNU_16G004870
Arecaceae Phoenix dactylifera 3 gene-LOC103706133, gene-LOC103709680, gene-LOC103710534
Asparagaceae Asparagus officinalis 4 AsparagusV1_02.2225.V1.1, AsparagusV1_02.852.V1.1 ...
AsparagusV1_07.1207.V1.1, AsparagusV1_08.3253.V1.1
Asteraceae Flaveria trinervia 5 Ftri13G16079, Ftri16G05451, Ftri18G12267, Ftri2G13905 ...
Ftri8G21164
Brassicaceae Arabidopsis thaliana 4 AT1G56560.1, AT3G05820.1, AT3G06500.1, AT5G22510.1
Brassicaceae Eutrema salsugineum 4 Thhalv10012973m.g.v1.0, Thhalv10020219m.g.v1.0 ...
Thhalv10020291m.g.v1.0, Thhalv10023341m.g.v1.0
Brassicaceae Schrenkiella parvula 4 Sp2g06210.v2.2, Sp3g04680.v2.2, Sp3g05450.v2.2 ...
Sp6g22750.v2.2
Brassicaceae Brassica nigra 4 BniB01g057140.2N, BniB02g041060.2N, BniB02g060110.2N ...
BniB07g059970.2N
Casuarinaceae Casuarina equisetifolia 4 Ceq05G1201, Ceq05G1766, Ceq06G1096, Ceq09G1389
Casuarinaceae Casuarina glauca 4 Cgl05G1212, Cgl05G1757, Cgl06G1136, Cgl09G1480
Cymodoceaceae Cymodocea nodosa 3 gene.Cymno04g06560, gene.Cymno05g05980, gene.Cymno07g00150
Hydrocharitaceae Thalassia testudinum 4 gene.Thate01g16680, gene.Thate02g01550, gene.Thate02g16200 ...
gene.Thate09g02500
Nitrariaceae Nitraria sibirica 4 evm.TU.LG02.1264, evm.TU.LG03.2569, evm.TU.LG09.723 ...
evm.TU.LG11.1148
Plantaginaceae Plantago ovata 3 Pov_00015840, Pov_00022553, Pov_00038152
Plumbaginaceae Limonium bicolor 7 Lb1G00711, Lb1G05638, Lb1G06745, Lb3G18925, Lb3G18926 ...
Lb3G19855, Lb6G31435
Poaceae Echinochloa crus-galli 12 AH01.3839, AH02.1552, AH07.2025, AH09.894, BH01.4182 ...
BH02.1617, BH07.1992, BH09.964, CH01.4468, CH02.1771, CH07.1843, CH09.1080
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_1AG0015580, gene-QOZ80_1BG0064400 ...
gene-QOZ80_2AG0132690, gene-QOZ80_2BG0188080, gene-QOZ80_3AG0246010, gene-QOZ80_3BG0282130, gene-QOZ80_4AG0318670
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.2HG0165830.1, HORVU.MOREX.r3.3HG0258530.2 ...
HORVU.MOREX.r3.4HG0381060.1
Poaceae Lolium multiflorum 3 gene-QYE76_022691, gene-QYE76_052828, gene-QYE76_068395
Poaceae Oryza coarctata 7 Oco01G009530, Oco02G009880, Oco03G011470, Oco04G011900 ...
Oco06G014510, Oco07G005160, Oco08G005130
Poaceae Oryza sativa 4 LOC_Os01g22900.1, LOC_Os02g32730.1, LOC_Os03g20020.1 ...
LOC_Os04g33490.1
Poaceae Paspalum vaginatum 2 gene-BS78_01G373300, gene-BS78_04G150300
Poaceae Puccinellia tenuiflora 5 Pt_Chr0107891, Pt_Chr0302846, Pt_Chr0302916, Pt_Chr0603594 ...
Pt_Chr0705135
Poaceae Sporobolus alterniflorus 12 Chr01G033190, Chr02G022680, Chr04G009780, Chr05G013580 ...
Chr07G001940, Chr09G015340, Chr0G019710, Chr0G029250, Chr12G006360, Chr13G011260, Chr15G012220, Chr23G013690
Poaceae Thinopyrum elongatum 4 Tel2E01G521100, Tel3E01G355600, Tel3E01G460800 ...
Tel4E01G323900
Poaceae Triticum dicoccoides 6 gene_TRIDC2AG042400, gene_TRIDC2BG045520 ...
gene_TRIDC3AG028020, gene_TRIDC3BG035130, gene_TRIDC4AG016560, gene_TRIDC4BG034250
Poaceae Triticum aestivum 9 TraesCS2A02G292900.1, TraesCS2B02G309800.1 ...
TraesCS2D02G291100.2, TraesCS3A02G195400.1, TraesCS3B02G232600.1, TraesCS3D02G200800.1, TraesCS4A02G124800.1, TraesCS4B02G179600.2, TraesCS4D02G181200.1
Poaceae Zea mays 4 Zm00001eb015090_P005, Zm00001eb131170_P001 ...
Zm00001eb181370_P001, Zm00001eb340670_P001
Poaceae Zoysia japonica 6 nbis-gene-1804, nbis-gene-18903, nbis-gene-3483 ...
nbis-gene-51026, nbis-gene-6466, nbis-gene-7753
Poaceae Zoysia macrostachya 6 Zma_g10268, Zma_g1342, Zma_g16405, Zma_g21220, Zma_g3748 ...
Zma_g7922
Portulacaceae Portulaca oleracea 7 evm.TU.LG08.1481, evm.TU.LG18.1009, evm.TU.LG18.1536 ...
evm.TU.LG19.351, evm.TU.LG20.344, evm.TU.LG20.865, evm.TU.LG22.373
Posidoniaceae Posidonia oceanica 2 gene.Posoc01g13390, gene.Posoc05g22710
Rhizophoraceae Bruguiera sexangula 4 evm.TU.Scaffold_13_RagTag.464, evm.TU.Scaffold_1_RagTag.47 ...
evm.TU.Scaffold_2_RagTag.1266, evm.TU.Scaffold_6_RagTag.1222
Rhizophoraceae Carallia pectinifolia 7 nbisL1-mrna-16202, nbisL1-mrna-2865, nbisL1-mrna-2930 ...
nbisL1-mrna-30642, nbisL1-mrna-3913, nbisL1-mrna-3969, nbisL1-mrna-8235
Rhizophoraceae Ceriops tagal 4 nbisL1-mrna-13682, nbisL1-mrna-17305, nbisL1-mrna-3787 ...
nbisL1-mrna-785
Rhizophoraceae Ceriops zippeliana 4 nbisL1-mrna-1053, nbisL1-mrna-18748, nbisL1-mrna-21033 ...
nbisL1-mrna-5138
Rhizophoraceae Kandelia candel 4 evm.TU.utg000009l.464, evm.TU.utg000011l.785 ...
evm.TU.utg000012l.31, evm.TU.utg000015l.241
Rhizophoraceae Kandelia obovata 4 Maker00004980, Maker00008014, Maker00011349, Maker00015355
Rhizophoraceae Rhizophora apiculata 4 nbisL1-mrna-12368, nbisL1-mrna-13515, nbisL1-mrna-4162 ...
nbisL1-mrna-7928
Rhizophoraceae Rhizophora mangle 5 nbisL1-mrna-22152, nbisL1-mrna-24676, nbisL1-mrna-4024 ...
nbisL1-mrna-41, nbisL1-mrna-5473
Salicaceae Populus euphratica 7 populus_peu06122, populus_peu06856, populus_peu08582 ...
populus_peu13201, populus_peu13258, populus_peu15588, populus_peu19984
Solanaceae Lycium barbarum 4 gene-LOC132598468, gene-LOC132600549, gene-LOC132612822 ...
gene-LOC132626756
Solanaceae Solanum pennellii 4 gene-LOC107004475, gene-LOC107004811, gene-LOC107008289 ...
gene-LOC107009180
Tamaricaceae Reaumuria soongarica 4 STRG.28396_chr04_+, STRG.32467_chr09_-, gene_4670, gene_6462
Tamaricaceae Tamarix chinensis 3 TC01G1400, TC02G1116, TC02G3563
Zosteraceae Zostera marina 3 Zosma01g36990.v3.1, Zosma03g17910.v3.1, Zosma04g24430.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.