Basic Information
Locus ID:
Ftri18G11017
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
ATPase family associated with various cellular activities (AAA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 10225240 | 10232446 | + | Ftri18G11017 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 88,132.25 Da | 46.11 | 84.38 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 527 | 660 | 9.55679E-25 | - |
| Pfam | PF17862 | AAA+ lid domain | 681 | 724 | 1.3E-12 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 529 | 659 | 6.3E-38 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 489 | 750 | 8.73E-59 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 661 | 755 | 1.5E-96 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 488 | 762 | 1.5E-96 | IPR027417 |
| SMART | SM00382 | AAA_5 | 525 | 662 | 1.2E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 632 | 651 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 474 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 718 | 738 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 474 | - | - |
| Coils | Coil | Coil | 711 | 734 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52882.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_022005429.1 | uncharacterized protein LOC110903939 isoform X1 [Helianthus annuus] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A251SKD7 | Putative P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0448961 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology