Basic Information
Locus ID:
Ftri18G10608
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Prokaryotic RING finger family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 81553035 | 81554684 | + | Ftri18G10608 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 18,223.69 Da | 59.86 | 77.59 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 118 | 155 | 6.52822E-8 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 116 | 160 | 1.9E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 109 | 163 | 1.44E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 109 | 165 | 2.8E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 118 | 155 | 2.8E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 118 | 156 | 10.895954 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 94 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03965.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_022011086.1 | uncharacterized protein LOC110910803 [Helianthus annuus] | 0 |
| TrEMBL | A0A251S642 | Putative RING/U-box superfamily protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr15g0470761 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology