Basic Information
Locus ID:
Ftri18G09436
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
PAN-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 72243075 | 72253444 | - | Ftri18G09436 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 139,372.80 Da | 37.40 | 91.79 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 354 | 654 | 7.65541E-82 | - |
| Pfam | PF14299 | Phloem protein 2 | 1056 | 1169 | 1.8E-10 | IPR025886 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 74 | 297 | 2.6E-21 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 684 | 955 | 9.4E-30 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 353 | 651 | 2.2E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 671 | 970 | 1.05E-50 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 15 | 306 | 7.26E-45 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 329 | 655 | 1.01E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 760 | 970 | 1.3E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 315 | 7.8E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 668 | 757 | 5.0E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 108 | 2.6E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 445 | 667 | 1.4E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 316 | 444 | 1.2E-28 | - |
| SMART | SM00220 | serkin_6 | 680 | 962 | 6.9E-11 | IPR000719 |
| SMART | SM00220 | serkin_6 | 348 | 656 | 1.1E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 680 | 959 | 26.08219 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 348 | 656 | 38.732121 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 35 | 310 | 21.417969 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 492 | 504 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G28680.1 | Malectin/receptor-like protein kinase family protein. Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip. | 0 |
| RefSeq | XP_022040038.1 | uncharacterized protein LOC110942571 isoform X3 [Helianthus annuus] | 0 |
| Q3E8W4 | Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana OX=3702 GN=ANX2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6MD14 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_33118 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 23 | Ftri11G02011, Ftri11G04674, Ftri11G06046, Ftri11G12255 ... |