Basic Information
Locus ID:
Ftri18G09157
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
CPK30
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 102621014 | 102624826 | - | Ftri18G09157 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 62,525.99 Da | 40.30 | 85.58 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 68 | 326 | 2.45531E-139 | - |
| CDD | cd00051 | EFh | 446 | 507 | 9.77839E-20 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 71 | 327 | 1.9E-77 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 445 | 507 | 1.3E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 373 | 434 | 2.9E-10 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 355 | 533 | 9.88E-45 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 54 | 350 | 3.64E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 155 | 336 | 5.2E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 70 | 154 | 3.4E-29 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 337 | 510 | 1.8E-53 | - |
| SMART | SM00054 | efh_1 | 446 | 474 | 0.0029 | IPR002048 |
| SMART | SM00054 | efh_1 | 374 | 402 | 1.2E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 481 | 509 | 2.2E-8 | IPR002048 |
| SMART | SM00220 | serkin_6 | 69 | 327 | 7.3E-100 | IPR000719 |
| SMART | SM00054 | efh_1 | 410 | 438 | 0.12 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 69 | 327 | 49.516361 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 477 | 512 | 15.433954 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 370 | 405 | 15.796595 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 406 | 441 | 9.687501 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 442 | 476 | 11.974924 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 490 | 502 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 75 | 98 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 189 | 201 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 383 | 395 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 419 | 431 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 40 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_035833797.1 | calcium-dependent protein kinase 30-like [Helianthus annuus] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6NL79 | Calcium-dependent protein kinase 30 OS=Mikania micrantha OX=192012 GN=E3N88_21028 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology