Basic Information
Locus ID:
Ftri18G05143
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 89877753 | 89880585 | + | Ftri18G05143 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.81 | 46,708.03 Da | 46.63 | 67.00 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 59 | 178 | 1.3E-10 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 43 | 197 | 5.75E-28 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 68 | 202 | 7.3E-16 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 58 | 219 | 17.922029 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 310 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_024994306.1 | SUPPRESSOR OF GAMMA RESPONSE 1 isoform X1 [Cynara cardunculus var. scolymus] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6L831 | NAC domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_45799 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology