Basic Information
Locus ID:
Ftri18G05091
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 95483871 | 95487381 | - | Ftri18G05091 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.41 | 127,006.19 Da | 37.70 | 86.03 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 34 | 404 | 4.1E-31 | IPR024788 |
| Pfam | PF00069 | Protein kinase domain | 867 | 1118 | 5.0E-16 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 504 | 764 | 2.7E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 837 | 1123 | 8.2E-44 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 480 | 765 | 2.29E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 463 | 572 | 1.4E-27 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 221 | 406 | 3.2E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 948 | 1132 | 4.3E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 826 | 947 | 5.1E-24 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 32 | 192 | 1.6E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 573 | 784 | 8.4E-61 | - |
| SMART | SM00220 | serkin_6 | 499 | 770 | 3.0E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 864 | 1124 | 13.078911 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 499 | 770 | 33.587345 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 870 | 893 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 614 | 626 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 505 | 528 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_022017553.1 | receptor-like protein kinase FERONIA [Helianthus annuus] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A251S1M9 | Putative serine/threonine/dual specificity protein kinase, catalytic domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr16g0522121 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 1 | Ftri18G05091 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00028085 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132624729, gene-LOC132625058 |
| Solanaceae | Solanum chilense | 1 | SOLCI001066700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107009272 |