Basic Information
Locus ID:
Ftri18G04724
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 91052024 | 91053686 | + | Ftri18G04724 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 41,066.60 Da | 43.08 | 75.43 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 66 | 330 | 3.76296E-89 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 61 | 330 | 2.9E-52 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 56 | 334 | 1.17E-66 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 38 | 137 | 1.6E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 159 | 349 | 5.0E-48 | - |
| SMART | SM00220 | serkin_6 | 60 | 334 | 3.4E-46 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 13 | 345 | 3.4E-51 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 60 | 334 | 38.364635 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 66 | 87 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 193 | 211 | 3.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 259 | 281 | 3.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 154 | 167 | 3.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 301 | 323 | 3.1E-13 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50000.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_035840201.1 | serine/threonine-protein kinase STY13-like [Helianthus annuus] | 0 |
| Q9FGB1 | Serine/threonine-protein kinase 52 OS=Arabidopsis thaliana OX=3702 GN=CBC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6Q2N8 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_02021 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 5 | Ftri18G04724, Ftri18G28326, Ftri7G01755, Ftri7G22207 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-58493 |