Basic Information
Locus ID:
Ftri18G04350
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 105837567 | 105839023 | - | Ftri18G04350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 48,481.43 Da | 44.76 | 95.79 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 27 | 61 | 6.0E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 67 | 280 | 1.33E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 23 | 61 | 5.36E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3 | 251 | 1.2E-7 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 25 | 71 | 9.047065 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021980818.1 | putative F-box/LRR-repeat protein At3g28410 [Helianthus annuus] | 0 |
| TrEMBL | A0A2U1PU83 | F-box domain, cyclin-like protein OS=Artemisia annua OX=35608 GN=CTI12_AA108110 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 3 | Ftri18G04350, Ftri18G17580, Ftri18G34167 |