Basic Information
Locus ID:
Ftri18G03572
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 81359369 | 81363476 | + | Ftri18G03572 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 76,148.55 Da | 40.59 | 93.47 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 414 | 666 | 2.8E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 2.2E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 384 | 666 | 6.18E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 236 | 1.51E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 470 | 693 | 4.6E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 367 | 469 | 5.7E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 248 | 5.2E-44 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 142 | 165 | 69.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 96 | 124 | 6.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 166 | 190 | 13.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 168 | 190 | 7.126702 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 669 | 32.711037 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 291 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_022011065.1 | protein STRUBBELIG-RECEPTOR FAMILY 8 [Helianthus annuus] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6PXM7 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_05241 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology