Basic Information
Locus ID:
Ftri18G03120
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
NIK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 95808885 | 95812507 | - | Ftri18G03120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 68,509.03 Da | 37.91 | 95.45 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 123 | 181 | 1.0E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 303 | 568 | 2.0E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 70 | 1.0E-12 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 195 | 3.35E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 280 | 571 | 3.86E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 212 | 2.2E-55 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 271 | 377 | 1.6E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 378 | 590 | 2.6E-61 | - |
| SMART | SM00220 | serkin_6 | 302 | 570 | 1.3E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 302 | 580 | 35.778114 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 420 | 432 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 308 | 330 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 586 | 613 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 586 | 622 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_021983137.1 | protein NSP-INTERACTING KINASE 1 [Helianthus annuus] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251TX42 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g0263331 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology