Basic Information
Locus ID:
Ftri18G02862
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 97406580 | 97409058 | - | Ftri18G02862 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.75 | 68,812.49 Da | 35.77 | 84.67 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 392 | 540 | 4.2E-22 | IPR000719 |
| Pfam | PF12819 | Malectin-like domain | 33 | 383 | 3.3E-35 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 390 | 547 | 3.55E-38 | IPR011009 |
| Gene3D | G3DSA:2.60.120.430 | - | 30 | 180 | 7.1E-16 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 211 | 384 | 4.1E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 385 | 570 | 5.9E-44 | - |
| SMART | SM00220 | serkin_6 | 275 | 550 | 9.3E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 156 | 550 | 20.089373 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 412 | 424 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23200.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_022025702.1 | probable receptor-like protein kinase At2g23200 [Helianthus annuus] | 0 |
| O22187 | Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana OX=3702 GN=At2g23200 PE=3 SV=1 | 0 | |
| TrEMBL | A0A251RPD3 | Putative serine-threonine/tyrosine-protein kinase catalytic domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr17g0546781 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 6 | jg30686, jg30687, jg30689, jg30691, jg30692, jg39988 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30205610 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G02862 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10000544m.g.v1.0 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-22992 |