Basic Information
Locus ID:
Ftri18G01112
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 94486617 | 94487758 | - | Ftri18G01112 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 41,687.76 Da | 50.93 | 75.26 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 158 | 201 | 4.6085E-21 | - |
| Pfam | PF13639 | Ring finger domain | 158 | 201 | 1.2E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 139 | 207 | 4.04E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 121 | 206 | 1.2E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 159 | 200 | 9.1E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 159 | 201 | 12.533537 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 369 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021983388.1 | RING-H2 finger protein ATL46 [Helianthus annuus] | 0 |
| Q9FL07 | RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6NHE0 | RING-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_24264 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology