Basic Information
Locus ID:
Ftri18G00605
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 99790321 | 99797930 | - | Ftri18G00605 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 182,714.06 Da | 42.49 | 109.10 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 169 | 398 | 1.0E-44 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 472 | 926 | 1.94E-25 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1048 | 1259 | 1.45E-12 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 155 | 412 | 4.53E-51 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 1280 | 1564 | 5.49E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1417 | 1581 | 8.7E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1025 | 1174 | 5.3E-8 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 152 | 310 | 2.4E-30 | IPR027417 |
| Gene3D | G3DSA:1.10.10.10 | - | 393 | 484 | 5.2E-8 | IPR036388 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 513 | 932 | 5.9E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1175 | 1327 | 1.6E-7 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 311 | 392 | 3.9E-19 | IPR042197 |
| SMART | SM00382 | AAA_5 | 177 | 313 | 3.9E-4 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 624 | 640 | 2.7E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 345 | 359 | 2.7E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 253 | 267 | 2.7E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 180 | 195 | 2.7E-20 | - |
| Coils | Coil | Coil | 156 | 176 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_021983514.1 | disease resistance protein SUMM2 [Helianthus annuus] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6NJ89 | NB-ARC domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_20633 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology