Basic Information
Locus ID:
Ftri17G33782
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 8781803 | 8784264 | + | Ftri17G33782 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.78 | 15,959.04 Da | 62.74 | 82.93 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 7 | 117 | 5.2204E-60 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 8 | 120 | 1.5E-43 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 1 | 121 | 3.8E-51 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1 | 134 | 2.7E-56 | IPR016135 |
| SMART | SM00212 | ubc_7 | 7 | 136 | 2.5E-45 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 4 | 140 | 47.570614 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 77 | 92 | - | IPR023313 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G14400.1 | ubiquitin carrier protein 1. ubiquitin carrier protein | 0 |
| RefSeq | XP_022026431.1 | ubiquitin-conjugating enzyme E2 2 [Helianthus annuus] | 0 |
| P25865 | Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana OX=3702 GN=UBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251VKZ7 | Putative ubiquitin-conjugating enzyme/RWD-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr02g0056391 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology