Basic Information
Locus ID:
Ftri17G30653
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 19338438 | 19356801 | - | Ftri17G30653 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 116,494.36 Da | 35.43 | 92.42 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 85 | 322 | 1.4E-25 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 715 | 994 | 5.8E-31 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 375 | 676 | 1.1E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 348 | 680 | 8.09E-72 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 688 | 1001 | 5.05E-46 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 62 | 322 | 1.01E-48 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 334 | 465 | 5.6E-27 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 43 | 158 | 1.7E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 467 | 687 | 6.4E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 688 | 800 | 8.7E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 161 | 333 | 3.0E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 801 | 1001 | 6.4E-39 | - |
| SMART | SM00220 | serkin_6 | 369 | 681 | 2.5E-38 | IPR000719 |
| SMART | SM00220 | serkin_6 | 705 | 1002 | 1.6E-9 | IPR000719 |
| SMART | SM00220 | serkin_6 | 82 | 331 | 3.1E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 681 | 39.919376 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 82 | 326 | 20.032837 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 705 | 998 | 26.280066 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 513 | 525 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59700.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_022009493.1 | ribosomal protein S6 kinase alpha-5 [Helianthus annuus] | 0 |
| Q9FN92 | Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana OX=3702 GN=At5g59700 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6Q2D2 | Non-specific serine/threonine protein kinase OS=Mikania micrantha OX=192012 GN=E3N88_00986 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 23 | Ftri11G02011, Ftri11G04674, Ftri11G06046, Ftri11G12255 ... |