Basic Information
Locus ID:
Ftri17G26407
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 10251542 | 10253535 | - | Ftri17G26407 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 61,486.65 Da | 35.26 | 86.39 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 159 | 418 | 2.2E-61 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 28 | 118 | 2.6E-7 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 22 | 116 | 5.76E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 15 | 121 | 3.3E-12 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 144 | 442 | 62.217354 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 97 | 10.69564 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 500 | 546 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 460 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_022005488.1 | BTB/POZ domain-containing protein NPY4 [Helianthus annuus] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251SIX7 | Putative SKP1/BTB/POZ domain, NPH3 domain protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0449511 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology