Basic Information
Locus ID:
Ftri17G25899
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 29096739 | 29100390 | - | Ftri17G25899 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.45 | 132,013.72 Da | 45.89 | 74.19 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 625 | 711 | 7.59221E-28 | - |
| Pfam | PF00855 | PWWP domain | 625 | 710 | 3.6E-15 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 621 | 748 | 1.87E-24 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 617 | 718 | 1.2E-23 | - |
| SMART | SM00293 | PWWP_4 | 625 | 686 | 1.4E-8 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 627 | 688 | 14.309474 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 568 | 589 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1037 | 1060 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 981 | 1001 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 551 | 599 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 980 | 1006 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 815 | 888 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1032 | 1094 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 243 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 276 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_022009196.1 | uncharacterized protein LOC110908557 [Helianthus annuus] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6Q0A1 | PWWP domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_01180 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology