Basic Information
Locus ID:
Ftri17G21018
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 4278580 | 4282378 | + | Ftri17G21018 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 65,972.43 Da | 44.80 | 88.31 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 28 | 123 | 1.1E-6 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 216 | 481 | 2.6E-88 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 21 | 124 | 4.94E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 17 | 126 | 1.1E-11 | IPR011333 |
| SMART | SM00225 | BTB_4 | 30 | 135 | 2.1E-4 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 216 | 505 | 71.106293 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 30 | 107 | 10.075179 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 547 | 585 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_022006192.1 | BTB/POZ domain-containing protein At5g03250 [Helianthus annuus] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6L978 | NPH3 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_45511 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology