Basic Information
Locus ID:
Ftri17G19305
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 94277480 | 94280526 | + | Ftri17G19305 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 94,760.78 Da | 31.82 | 102.28 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 520 | 555 | 2.9E-6 | IPR025875 |
| Pfam | PF13855 | Leucine rich repeat | 217 | 276 | 1.7E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 647 | 853 | 4.3E-31 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 470 | 494 | 1.8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 348 | 586 | 4.08E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 651 | 853 | 4.45E-51 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 46 | 336 | 1.88E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3 | 177 | 3.0E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 342 | 595 | 1.4E-69 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 178 | 341 | 1.6E-43 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 626 | 861 | 2.7E-55 | - |
| SMART | SM00369 | LRR_typ_2 | 239 | 262 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 287 | 311 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 470 | 494 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 399 | 423 | 340.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 604 | 854 | 1.0E-9 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 142 | 166 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 542 | 565 | 110.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 533 | 854 | 25.629902 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 709 | 721 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_024962951.1 | receptor protein kinase CLAVATA1-like [Cynara cardunculus var. scolymus] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A5N6PYR3 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_00651 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology