Basic Information
Locus ID:
Ftri17G19151
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 4791741 | 4801407 | + | Ftri17G19151 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 80,795.21 Da | 48.79 | 80.22 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 452 | 705 | 6.44941E-87 | - |
| CDD | cd01989 | STK_N | 29 | 165 | 2.58555E-58 | - |
| Pfam | PF00069 | Protein kinase domain | 447 | 699 | 2.5E-40 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 30 | 154 | 4.1E-11 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 30 | 161 | 3.01E-11 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 427 | 705 | 1.62E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 416 | 518 | 6.7E-26 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 28 | 162 | 3.9E-12 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 519 | 720 | 1.7E-47 | - |
| SMART | SM00220 | serkin_6 | 446 | 710 | 1.7E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 446 | 709 | 35.721577 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 564 | 576 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 328 | - | - |
| Coils | Coil | Coil | 368 | 409 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_035839032.1 | U-box domain-containing protein 35 [Helianthus annuus] | 0 |
| Q9FKG5 | U-box domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=PUB51 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N6LKB1 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_41844 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology