Basic Information
Locus ID:
Ftri17G17475
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
LYK4
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 9454587 | 9456755 | + | Ftri17G17475 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 71,626.90 Da | 47.02 | 93.26 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | 193 | 232 | 0.0017 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 370 | 624 | 1.7E-36 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 343 | 627 | 2.81E-59 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 331 | 423 | 9.6E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 425 | 645 | 1.6E-51 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 300 | 631 | 28.640444 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 186 | 231 | 10.428626 | IPR018392 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 263 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_021983215.1 | lysM domain receptor-like kinase 4 [Helianthus annuus] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6Q442 | LysM domain receptor-like kinase 4 OS=Mikania micrantha OX=192012 GN=E3N88_02561 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology