Basic Information
Locus ID:
Ftri17G16656
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
NEK1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 15912790 | 15920469 | - | Ftri17G16656 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 67,104.98 Da | 52.71 | 72.69 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 3 | 258 | 1.74908E-132 | - |
| Pfam | PF00069 | Protein kinase domain | 4 | 257 | 1.0E-62 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 315 | 2.97E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 83 | 3.6E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 84 | 274 | 7.5E-55 | - |
| SMART | SM00220 | serkin_6 | 4 | 258 | 2.9E-78 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 258 | 44.753204 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 125 | 137 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 519 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 396 | 411 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 533 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 383 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 415 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 326 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54510.1 | NIMA-related serine/threonine kinase 1. Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_022005145.1 | serine/threonine-protein kinase Nek2 [Helianthus annuus] | 0 |
| A2ZMH2 | Serine/threonine-protein kinase Nek2 OS=Oryza sativa subsp. indica OX=39946 GN=NEK2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A251SI99 | Putative NIMA-related kinase 2 OS=Helianthus annuus OX=4232 GN=ATNEK2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology