Basic Information
Locus ID:
Ftri17G16150
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
prolyl 4-hydroxylase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 12442744 | 12445095 | - | Ftri17G16150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 32,067.91 Da | 45.05 | 82.47 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13640 | 2OG-Fe(II) oxygenase superfamily | 169 | 281 | 9.8E-18 | IPR044862 |
| Gene3D | G3DSA:2.60.120.620 | q2cbj1_9rhob like domain | 81 | 282 | 1.5E-70 | - |
| SMART | SM00702 | p4hc | 89 | 281 | 2.7E-54 | IPR006620 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 165 | 282 | 11.2335 | IPR005123 |
| Coils | Coil | Coil | 285 | 287 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66060.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. | 0 |
| RefSeq | XP_022009758.1 | probable prolyl 4-hydroxylase 10 [Helianthus annuus] | 0 |
| F4JZ24 | Probable prolyl 4-hydroxylase 10 OS=Arabidopsis thaliana OX=3702 GN=P4H10 PE=3 SV=1 | 0 | |
| TrEMBL | A0A251SHL4 | Putative oxoglutarate/iron-dependent dioxygenase OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0442021 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology