Basic Information
Locus ID:
Ftri17G15571
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 50821552 | 50823586 | - | Ftri17G15571 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 58,498.25 Da | 39.65 | 86.03 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 247 | 352 | 2.643E-25 | IPR033734 |
| CDD | cd09612 | Jacalin | 375 | 506 | 2.48442E-26 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 285 | 353 | 6.1E-13 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 384 | 506 | 3.1E-12 | IPR001229 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 2 | 165 | 2.9E-29 | IPR001245 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 233 | 353 | 5.63E-20 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 357 | 505 | 1.44E-23 | IPR036404 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 215 | 6.47E-51 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 56 | 229 | 5.0E-36 | - |
| Gene3D | G3DSA:2.100.10.30 | - | 230 | 353 | 9.5E-23 | IPR036404 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 55 | 2.6E-14 | - |
| Gene3D | G3DSA:2.100.10.30 | - | 354 | 506 | 1.6E-33 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 372 | 507 | 5.5E-4 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 237 | 353 | 5.7E-5 | IPR001229 |
| SMART | SM00220 | serkin_6 | 2 | 214 | 2.4E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 214 | 23.637007 | IPR000719 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 225 | 353 | 21.767063 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 357 | 507 | 22.179749 | IPR001229 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 98 | 110 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59700.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_022009536.1 | putative receptor-like protein kinase At5g39000 [Helianthus annuus] | 0 |
| Q9FN92 | Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana OX=3702 GN=At5g59700 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251SGA9 | Putative jacalin-like lectin domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0439381 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 5 | Ftri17G09392, Ftri17G15571, Ftri17G24526, Ftri6G03856 ... |