Basic Information
Locus ID:
Ftri17G11293
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Cell division cycle
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 1661024 | 1662528 | - | Ftri17G11293 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 43,273.29 Da | 37.95 | 81.58 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 107 | 165 | 5.6E-5 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 189 | 223 | 5.9E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 329 | 362 | 0.0017 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 234 | 272 | 0.0039 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 53 | 363 | 3.48E-53 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 14 | 365 | 2.1E-103 | IPR015943 |
| SMART | SM00320 | WD40_4 | 230 | 272 | 2.7E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 106 | 142 | 2.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 323 | 362 | 7.5E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 145 | 181 | 180.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 185 | 224 | 2.3E-8 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 330 | 363 | 11.602863 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 237 | 281 | 8.67045 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 192 | 224 | 11.444681 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 192 | 233 | 14.117617 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 330 | 363 | 14.017362 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 349 | 363 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 349 | 363 | 6.3E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 259 | 273 | 6.3E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 211 | 225 | 6.3E-5 | IPR020472 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27570.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_022006568.1 | cell division cycle 20.5, cofactor of APC complex [Helianthus annuus] | 0 |
| Q54MZ3 | Anaphase-promoting complex subunit cdc20 OS=Dictyostelium discoideum OX=44689 GN=cdc20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6Q6R7 | ANAPC4_WD40 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_03448 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology