Basic Information
Locus ID:
Ftri17G10496
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 2953353 | 2953811 | + | Ftri17G10496 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 17,277.61 Da | 19.49 | 77.50 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 1 | 101 | 1.1E-36 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 26 | 99 | 5.5E-25 | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38930.2 | Ubiquitin fusion degradation UFD1 family protein. | 0 |
| RefSeq | XP_035839389.1 | ubiquitin fusion degradation protein 1 homolog [Helianthus annuus] | 0 |
| Q92890 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Homo sapiens OX=9606 GN=UFD1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A251SL58 | Putative ubiquitin fusion degradation protein UFD1 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0458361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology