Basic Information
Locus ID:
Ftri17G09392
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 3313488 | 3316298 | + | Ftri17G09392 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.05 | 51,454.23 Da | 28.97 | 89.17 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 332 | 452 | 1.18361E-25 | IPR033734 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 21 | 283 | 1.0E-35 | IPR001245 |
| Pfam | PF01419 | Jacalin-like lectin domain | 334 | 453 | 4.2E-13 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 312 | 453 | 9.81E-26 | IPR036404 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 285 | 3.91E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 93 | 305 | 5.0E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 19 | 92 | 7.1E-18 | - |
| Gene3D | G3DSA:2.100.10.30 | - | 311 | 459 | 3.9E-34 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 336 | 457 | 0.0032 | IPR001229 |
| SMART | SM00220 | serkin_6 | 21 | 293 | 4.9E-13 | IPR000719 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 310 | 457 | 22.207886 | IPR001229 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 14 | 289 | 31.000822 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 135 | 147 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G39000.1 | Malectin/receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_022006296.2 | probable serine/threonine-protein kinase PBL28 isoform X1 [Helianthus annuus] | 0 |
| Q9FID8 | Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana OX=3702 GN=At5g39000 PE=3 SV=1 | 0 | |
| TrEMBL | A0A251SLH0 | Putative jacalin-like lectin domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0458121 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 5 | Ftri17G09392, Ftri17G15571, Ftri17G24526, Ftri6G03856 ... |