Basic Information
Locus ID:
Ftri17G08384
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 6480408 | 6482958 | - | Ftri17G08384 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.96 | 28,167.71 Da | 50.50 | 52.66 | -1.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 81 | 161 | 6.6E-24 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 256 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 218 | - | - |
| Coils | Coil | Coil | 93 | 123 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_022005886.1 | protein WVD2-like 4 isoform X1 [Helianthus annuus] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A251SJW0 | Putative TPX2 domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0453281 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology