Basic Information
Locus ID:
Ftri17G08196
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 1337533 | 1341222 | - | Ftri17G08196 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.72 | 57,657.87 Da | 31.10 | 101.88 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 403 | 519 | 5.5E-17 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 65 | 6.1E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 141 | 200 | 5.4E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 233 | 7.29E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 381 | 518 | 6.26E-27 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 258 | 5.7E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 384 | 525 | 3.5E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 138 | 1.2E-27 | IPR032675 |
| SMART | SM00219 | tyrkin_6 | 399 | 527 | 0.0087 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 399 | 531 | 15.114206 | IPR000719 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_022006631.1 | LRR receptor kinase SERK2 [Helianthus annuus] | 0 |
| O24585 | Putative receptor protein kinase CRINKLY4 OS=Zea mays OX=4577 GN=CR4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6Q6U2 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_03531 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology