Basic Information
Locus ID:
Ftri17G06323
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
STE20-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 19475869 | 19484712 | - | Ftri17G06323 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 94,249.91 Da | 40.79 | 87.39 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 403 | 651 | 1.6E-39 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 85 | 319 | 1.2E-24 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 694 | 820 | 5.6E-15 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 67 | 320 | 2.39E-46 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 674 | 819 | 1.97E-23 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 344 | 655 | 1.21E-64 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 460 | 673 | 2.2E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 330 | 457 | 4.3E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 43 | 156 | 1.4E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 674 | 820 | 4.6E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 159 | 329 | 3.9E-37 | - |
| SMART | SM00220 | serkin_6 | 361 | 660 | 3.1E-33 | IPR000719 |
| SMART | SM00220 | serkin_6 | 83 | 324 | 9.4E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 683 | 820 | 14.647784 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 83 | 324 | 20.386187 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 361 | 659 | 36.018391 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 491 | 503 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59700.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_022009493.1 | ribosomal protein S6 kinase alpha-5 [Helianthus annuus] | 0 |
| Q9FN92 | Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana OX=3702 GN=At5g59700 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251SFT3 | Putative IQ motif, EF-hand binding site OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0436341 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 23 | Ftri11G02011, Ftri11G04674, Ftri11G06046, Ftri11G12255 ... |