Basic Information
Locus ID:
Ftri17G05096
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
domain in TBC and LysM domain containing proteins
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 16036169 | 16039923 | - | Ftri17G05096 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.08 | 41,983.34 Da | 46.38 | 69.61 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07534 | TLD | 221 | 358 | 1.7E-28 | IPR006571 |
| SMART | SM00584 | 109ultra | 195 | 359 | 1.9E-31 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 196 | 359 | 25.837738 | IPR006571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 101 | 120 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G39870.1 | TLD-domain containing nucleolar protein. | 0 |
| RefSeq | XP_022005128.1 | oxidation resistance protein 1 [Helianthus annuus] | 0 |
| Q6BJM5 | Oxidation resistance protein 1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=OXR1 PE=3 SV=2 | 0 | |
| TrEMBL | A0A251SI90 | Putative TLD-domain containing nucleolar protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0445771 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology