Basic Information
Locus ID:
Ftri17G01479
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 763812 | 766454 | - | Ftri17G01479 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 77,627.58 Da | 39.06 | 83.49 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 19 | 200 | 4.21693E-90 | - |
| Pfam | PF00183 | Hsp90 protein | 182 | 671 | 7.3E-217 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 32 | 179 | 2.5E-10 | IPR003594 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 261 | 496 | 2.5E-99 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 10 | 211 | 3.44E-60 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 520 | 642 | 6.15E-39 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 261 | 387 | 1.8E-65 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 2 | 226 | 1.5E-77 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 388 | 494 | 3.9E-47 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 495 | 647 | 1.9E-66 | IPR037196 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 1 | 391 | 7.1E-142 | IPR001404 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 386 | 676 | 1.2E-86 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 30 | 39 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 80 | 97 | 5.2E-52 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 10 | 30 | 5.2E-52 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 186 | 204 | 5.2E-52 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 31 | 53 | 5.2E-52 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 168 | 185 | 5.2E-52 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 7 | 643 | 24.036087 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 649 | 676 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 236 | - | - |
| Coils | Coil | Coil | 225 | 255 | - | - |
| Coils | Coil | Coil | 495 | 521 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_022006706.1 | heat shock protein 83-like [Helianthus annuus] | 0 |
| P51819 | Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1 | 0 | |
| TrEMBL | A0A251SM99 | Putative heat shock protein Hsp90 family OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0462551 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology