Basic Information
Locus ID:
Ftri17G01388
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 41012853 | 41014550 | + | Ftri17G01388 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 41,427.96 Da | 32.19 | 85.54 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 213 | 356 | 5.5E-10 | IPR025886 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 28 | 138 | 5.8E-19 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 14 | 139 | 2.2E-28 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 102 | 1.4E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 105 | 150 | 2.7E-5 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 24 | 359 | 12.131932 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59700.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_043630327.1 | uncharacterized protein LOC122601647 [Erigeron canadensis] | 0 |
| Q9FN92 | Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana OX=3702 GN=At5g59700 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251UNX6 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr05g0136981 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 30 | Ftri11G25505, Ftri12G15517, Ftri14G01992, Ftri14G04619 ... |